Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | DUE52_25005 | Not Available | Positive | 6223772 - 6224992 | 45690.5 |
| duf2264 domain-containing protein | DUE52_25010 | Not Available | Positive | 6225179 - 6226432 | 47613.0 |
| ygiq family radical sam protein | DUE52_25015 | Not Available | Negative | 6226540 - 6228429 | 72327.6 |
| dienelactone hydrolase | DUE52_25020 | Not Available | Negative | 6228515 - 6229819 | 46924.2 |
| arsc family reductase | DUE52_25025 | Not Available | Positive | 6230057 - 6230404 | 13474.3 |
| group iii truncated hemoglobin | DUE52_25030 | Not Available | Positive | 6230427 - 6230828 | 15681.5 |
| duf2306 domain-containing protein | DUE52_25035 | Not Available | Positive | 6230992 - 6231639 | 24539.7 |
| duf2256 domain-containing protein | DUE52_25040 | Not Available | Negative | 6231648 - 6231788 | 5576.84 |
| flavin reductase | DUE52_25045 | Not Available | Negative | 6231789 - 6232433 | 24022.4 |
| atp-binding protein | DUE52_25050 | Not Available | Negative | 6232483 - 6233655 | 44040.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
