Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | DUE52_24955 | Not Available | Positive | 6213105 - 6214076 | 35401.7 |
| glycoside hydrolase | DUE52_24960 | Not Available | Positive | 6214599 - 6216620 | 74379.0 |
| nitrilase | DUE52_24965 | Not Available | Positive | 6216990 - 6217955 | 36211.3 |
| lrp/asnc family transcriptional regulator | DUE52_24970 | Not Available | Negative | 6218053 - 6218517 | 17932.9 |
| alpha/beta hydrolase | DUE52_24975 | Not Available | Negative | 6218708 - 6219496 | 29000.6 |
| hypothetical protein | DUE52_24980 | Not Available | Positive | 6219740 - 6219976 | 8176.98 |
| crp/fnr family transcriptional regulator | DUE52_24985 | Not Available | Negative | 6220010 - 6220597 | 23136.5 |
| amidohydrolase | DUE52_24990 | Not Available | Negative | 6220604 - 6222268 | 61312.1 |
| hypothetical protein | DUE52_24995 | Not Available | Positive | 6222381 - 6223319 | 36880.5 |
| duf2281 domain-containing protein | DUE52_25000 | Not Available | Positive | 6223392 - 6223595 | 7635.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
