Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | DUE52_24900 | Not Available | Positive | 6200081 - 6200629 | 20151.4 |
| hypothetical protein | DUE52_24905 | Not Available | Positive | 6200709 - 6201053 | 12809.3 |
| nadh-quinone oxidoreductase subunit c | DUE52_24910 | Not Available | Positive | 6201062 - 6201559 | 19017.8 |
| hypothetical protein | DUE52_24915 | Not Available | Positive | 6201684 - 6203312 | 61707.8 |
| hypothetical protein | DUE52_24920 | Not Available | Negative | 6203392 - 6203745 | 12806.3 |
| hnh endonuclease | DUE52_24925 | Not Available | Negative | 6204228 - 6204998 | 29983.0 |
| hypothetical protein | DUE52_24935 | Not Available | Negative | 6205505 - 6208324 | 99040.7 |
| duf3748 domain-containing protein | DUE52_24940 | Not Available | Negative | 6208799 - 6210097 | 47664.8 |
| arac family transcriptional regulator | DUE52_24945 | Not Available | Negative | 6210221 - 6211087 | 33203.8 |
| sodium:solute symporter | DUE52_24950 | Not Available | Positive | 6211373 - 6212971 | 58240.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
