Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DUE52_24850 | Not Available | Negative | 6189749 - 6190090 | 12955.7 |
| pas domain-containing sensor histidine kinase | DUE52_24855 | Not Available | Positive | 6190389 - 6192005 | 60903.5 |
| response regulator | DUE52_24860 | Not Available | Positive | 6191983 - 6193029 | 39184.8 |
| duf3267 domain-containing protein | DUE52_24865 | Not Available | Negative | 6193137 - 6193793 | 24609.5 |
| m1 family peptidase | DUE52_24870 | Not Available | Positive | 6193933 - 6195615 | 65638.6 |
| hypothetical protein | DUE52_24875 | Not Available | Positive | 6195620 - 6196384 | 28376.5 |
| bifunctional metallophosphatase/5'-nucleotidase | DUE52_24880 | Not Available | Positive | 6196362 - 6197285 | 34109.0 |
| nad(p)/fad-dependent oxidoreductase | DUE52_24885 | Not Available | Positive | 6197399 - 6198730 | 49363.1 |
| fatty acid hydroxylase | DUE52_24890 | Not Available | Positive | 6198840 - 6199460 | 23725.8 |
| nadh-quinone oxidoreductase subunit a | DUE52_24895 | Not Available | Positive | 6199467 - 6199949 | 18059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
