Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DUE52_24800 | Not Available | Positive | 6173744 - 6174358 | 24177.2 |
| fecr family protein | DUE52_24805 | Not Available | Positive | 6174450 - 6175538 | 40738.8 |
| susc/raga family tonb-linked outer membrane protein | DUE52_24810 | Not Available | Positive | 6175734 - 6179375 | 132648.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_24815 | Not Available | Positive | 6179376 - 6181061 | 62314.9 |
| phosphoenolpyruvate synthase | DUE52_24820 | Not Available | Negative | 6181280 - 6183676 | 88079.2 |
| response regulator | DUE52_24825 | Not Available | Positive | 6184059 - 6185159 | 41383.5 |
| universal stress protein | DUE52_24830 | Not Available | Positive | 6185256 - 6186083 | 30916.3 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_24835 | Not Available | Positive | 6186108 - 6186863 | 26330.6 |
| 1-phosphofructokinase family hexose kinase | DUE52_24840 | Not Available | Positive | 6186956 - 6187900 | 34036.1 |
| hypothetical protein | DUE52_24845 | Not Available | Positive | 6187975 - 6189738 | 62309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
