Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | DUE52_24750 | Not Available | Negative | 6163535 - 6163792 | 9501.25 |
| had family hydrolase | DUE52_24755 | Not Available | Negative | 6163897 - 6166362 | 91630.3 |
| oxygen-independent coproporphyrinogen iii oxidase | DUE52_24760 | Not Available | Positive | 6166495 - 6167856 | 52105.7 |
| hypothetical protein | DUE52_24765 | Not Available | Negative | 6168049 - 6168576 | 19924.7 |
| hypothetical protein | DUE52_24770 | Not Available | Negative | 6168595 - 6169260 | 24291.1 |
| hypothetical protein | DUE52_24775 | Not Available | Negative | 6169384 - 6169833 | 17090.6 |
| hypothetical protein | DUE52_24780 | Not Available | Negative | 6169839 - 6170963 | 42699.6 |
| hypothetical protein | DUE52_24785 | Not Available | Positive | 6171175 - 6171420 | 9693.58 |
| universal stress protein | DUE52_24790 | Not Available | Positive | 6171472 - 6172290 | 29812.7 |
| universal stress protein | DUE52_24795 | Not Available | Positive | 6172390 - 6173265 | 32316.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
