Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DUE52_24700 | Not Available | Positive | 6153124 - 6154341 | 43906.1 |
| adenosylhomocysteinase | DUE52_24705 | Not Available | Positive | 6154465 - 6155781 | 48371.9 |
| sulfite exporter taue/safe family protein | DUE52_24710 | Not Available | Negative | 6155881 - 6156582 | 24755.3 |
| nitrogen fixation protein fixh | DUE52_24715 | Not Available | Negative | 6156584 - 6157009 | 16132.2 |
| 4fe-4s binding protein | DUE52_24720 | Not Available | Negative | 6157132 - 6158673 | 57881.2 |
| cytochrome c | DUE52_24725 | Not Available | Negative | 6158686 - 6159528 | 30445.9 |
| cytochrome-c oxidase, cbb3-type subunit i | DUE52_24730 | Not Available | Negative | 6159814 - 6162012 | 83060.6 |
| cbb3-type cytochrome oxidase assembly protein ccos | DUE52_24735 | Not Available | Negative | 6162009 - 6162203 | 7156.71 |
| acyl-coa desaturase | DUE52_24740 | Not Available | Positive | 6162398 - 6163147 | 29834.2 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DUE52_24745 | Not Available | Negative | 6163218 - 6163547 | 12180.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
