Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DUE52_24650 | Not Available | Negative | 6145805 - 6146074 | 9754.71 |
| hypothetical protein | DUE52_24655 | Not Available | Negative | 6146446 - 6147627 | 42643.9 |
| yafy family transcriptional regulator | DUE52_24660 | Not Available | Positive | 6147834 - 6148796 | 37440.9 |
| gyri-like domain-containing protein | DUE52_24665 | Not Available | Positive | 6148876 - 6149331 | 16537.7 |
| glyoxalase | DUE52_24670 | Not Available | Positive | 6149344 - 6149724 | 14311.9 |
| hypothetical protein | DUE52_24675 | Not Available | Positive | 6150071 - 6150454 | 14559.5 |
| nudix domain-containing protein | DUE52_24680 | Not Available | Negative | 6150494 - 6150991 | 18720.3 |
| holliday junction resolvase ruvx | DUE52_24685 | Not Available | Positive | 6151075 - 6151488 | 15243.6 |
| peptide deformylase | DUE52_24690 | Not Available | Positive | 6151488 - 6152060 | 21887.1 |
| amidohydrolase | DUE52_24695 | Not Available | Positive | 6152188 - 6152958 | 29230.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
