Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | DUE52_02410 | Not Available | Positive | 599603 - 600481 | 33462.3 |
| tonb-dependent receptor | DUE52_02415 | Not Available | Negative | 600532 - 603552 | 109366.0 |
| mannose-1-phosphate guanylyltransferase | DUE52_02420 | Not Available | Positive | 603981 - 605054 | 40333.8 |
| thiamine-phosphate kinase | DUE52_02425 | Not Available | Negative | 605137 - 606171 | 37658.9 |
| hypothetical protein | DUE52_02430 | Not Available | Negative | 606265 - 606711 | 15943.0 |
| cytochrome b5 | DUE52_02435 | Not Available | Positive | 606840 - 607094 | 9722.31 |
| n-acetylglucosamine kinase | DUE52_02440 | Not Available | Positive | 607116 - 607988 | 32307.2 |
| t9ss c-terminal target domain-containing protein | DUE52_02445 | Not Available | Negative | 608067 - 614495 | 230390.0 |
| glycosyltransferase | DUE52_02450 | Not Available | Negative | 615020 - 616129 | 41834.7 |
| oxidoreductase | DUE52_02455 | Not Available | Positive | 616369 - 617439 | 39537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
