Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase | DUE52_24600 | Not Available | Positive | 6134206 - 6135321 | 42024.5 |
| arac family transcriptional regulator | DUE52_24605 | Not Available | Positive | 6135770 - 6136645 | 33631.2 |
| amino acid permease | DUE52_24610 | Not Available | Negative | 6136655 - 6138100 | 52794.4 |
| signal peptidase-like protein | DUE52_24615 | Not Available | Positive | 6138566 - 6139774 | 45287.3 |
| dabb family protein | DUE52_24620 | Not Available | Negative | 6139828 - 6140127 | 11616.5 |
| rna pseudouridine synthase | DUE52_24625 | Not Available | Negative | 6140191 - 6140910 | 27283.1 |
| dna-3-methyladenine glycosylase i | DUE52_24630 | Not Available | Positive | 6141093 - 6141665 | 21928.4 |
| duf4595 domain-containing protein | DUE52_24635 | Not Available | Negative | 6142200 - 6143072 | 32213.1 |
| acetylxylan esterase | DUE52_24640 | Not Available | Positive | 6143324 - 6144574 | 46633.4 |
| alkene reductase | DUE52_24645 | Not Available | Negative | 6144639 - 6145730 | 39449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
