Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4293 family protein | DUE52_24550 | Not Available | Positive | 6115679 - 6116152 | 17873.4 |
| kpsf/gutq family sugar-phosphate isomerase | DUE52_24555 | Not Available | Negative | 6116242 - 6117219 | 35032.7 |
| dna helicase recq | DUE52_24560 | Not Available | Positive | 6117307 - 6119517 | 83839.2 |
| phosphoribosylamine--glycine ligase | DUE52_24565 | Not Available | Positive | 6119619 - 6120908 | 46358.9 |
| carboxypeptidase | DUE52_24570 | Not Available | Negative | 6121065 - 6122636 | 58952.3 |
| carboxypeptidase | DUE52_24575 | Not Available | Negative | 6122670 - 6124157 | 56234.8 |
| hypothetical protein | DUE52_24580 | Not Available | Negative | 6124353 - 6127250 | 109772.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_24585 | Not Available | Negative | 6127284 - 6128807 | 56378.1 |
| susc/raga family tonb-linked outer membrane protein | DUE52_24590 | Not Available | Negative | 6128841 - 6131996 | 113346.0 |
| l-glutamate gamma-semialdehyde dehydrogenase | DUE52_24595 | Not Available | Negative | 6132330 - 6133961 | 59903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
