Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase family protein | DUE52_24450 | Not Available | Positive | 6093581 - 6095215 | 58591.9 |
| is200/is605 family transposase | DUE52_24455 | Not Available | Negative | 6095751 - 6096212 | 18290.9 |
| gmc family oxidoreductase | DUE52_24460 | Not Available | Negative | 6096687 - 6098405 | 63907.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | DUE52_24465 | Not Available | Negative | 6098419 - 6098940 | 19388.3 |
| port family protein | DUE52_24470 | Not Available | Positive | 6099309 - 6100142 | 29202.8 |
| abc transporter permease | DUE52_24475 | Not Available | Negative | 6100233 - 6102704 | 91480.4 |
| hypothetical protein | DUE52_24480 | Not Available | Positive | 6102741 - 6103022 | 10604.6 |
| beta-xylosidase | DUE52_24485 | Not Available | Positive | 6103250 - 6104233 | 36905.9 |
| hypothetical protein | DUE52_24490 | Not Available | Negative | 6104292 - 6104732 | 17269.0 |
| arac family transcriptional regulator | DUE52_24495 | Not Available | Negative | 6104839 - 6105741 | 34567.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
