Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhyh protein | DUE52_24400 | Not Available | Positive | 6081165 - 6081932 | 28026.6 |
| sco family protein | DUE52_24405 | Not Available | Positive | 6082169 - 6083113 | 34547.4 |
| port family protein | DUE52_24410 | Not Available | Negative | 6083110 - 6084003 | 33266.6 |
| gliding motility protein | DUE52_24415 | Not Available | Positive | 6084042 - 6085019 | 37205.6 |
| atp-binding cassette domain-containing protein | DUE52_24420 | Not Available | Positive | 6085199 - 6087013 | 66784.5 |
| transcriptional repressor | DUE52_24425 | Not Available | Positive | 6087039 - 6087470 | 16308.3 |
| dna mismatch repair protein muts | DUE52_24430 | Not Available | Positive | 6087470 - 6089278 | 67992.8 |
| atpase | DUE52_24435 | Not Available | Negative | 6089275 - 6090489 | 45916.2 |
| leucyl aminopeptidase | DUE52_24440 | Not Available | Negative | 6090782 - 6092245 | 53177.0 |
| alpha/beta hydrolase | DUE52_24445 | Not Available | Negative | 6092357 - 6093415 | 40111.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
