Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DUE52_24300 | Not Available | Positive | 6059859 - 6061307 | 53837.8 |
| hypothetical protein | DUE52_24305 | Not Available | Negative | 6061356 - 6061580 | 8851.46 |
| galactokinase | DUE52_24310 | Not Available | Negative | 6061827 - 6062999 | 43634.9 |
| atp-binding protein | DUE52_24315 | Not Available | Positive | 6063229 - 6064770 | 56305.4 |
| atp-binding protein | DUE52_24320 | Not Available | Negative | 6064775 - 6065905 | 43475.6 |
| dna replication and repair protein recf | DUE52_24325 | Not Available | Negative | 6065995 - 6067080 | 42204.2 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | DUE52_24330 | Not Available | Positive | 6067250 - 6068308 | 39219.6 |
| cytochrome c biosynthesis protein | DUE52_24335 | Not Available | Positive | 6068495 - 6069196 | 25563.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | DUE52_24340 | Not Available | Positive | 6069385 - 6069882 | 17752.1 |
| aspartate kinase | DUE52_24345 | Not Available | Positive | 6069993 - 6071327 | 49565.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
