Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DUE52_24250 | Not Available | Positive | 6042907 - 6043929 | 38359.4 |
| carbohydrate kinase | DUE52_24255 | Not Available | Negative | 6043949 - 6045427 | 53454.7 |
| hypothetical protein | DUE52_24260 | Not Available | Positive | 6045643 - 6045891 | 8978.69 |
| response regulator | DUE52_24265 | Not Available | Positive | 6046094 - 6050122 | 151768.0 |
| hypothetical protein | DUE52_24270 | Not Available | Positive | 6050336 - 6051448 | 42062.3 |
| class a beta-lactamase-related serine hydrolase | DUE52_24275 | Not Available | Positive | 6051891 - 6053141 | 45366.7 |
| class a beta-lactamase-related serine hydrolase | DUE52_24280 | Not Available | Positive | 6053207 - 6054427 | 45233.7 |
| hypothetical protein | DUE52_24285 | Not Available | Positive | 6054505 - 6055812 | 47893.7 |
| s9 family peptidase | DUE52_24290 | Not Available | Negative | 6055907 - 6057979 | 79240.6 |
| m20/m25/m40 family metallo-hydrolase | DUE52_24295 | Not Available | Positive | 6058138 - 6059646 | 55567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
