Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | DUE52_24200 | Not Available | Positive | 6029242 - 6030006 | 28808.4 |
| (2fe-2s)-binding protein | DUE52_24205 | Not Available | Positive | 6030103 - 6030576 | 17037.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_24210 | Not Available | Positive | 6030595 - 6032820 | 82030.7 |
| hypothetical protein | DUE52_24215 | Not Available | Positive | 6032904 - 6033260 | 13437.3 |
| hypothetical protein | DUE52_24220 | Not Available | Positive | 6033257 - 6033745 | 17570.2 |
| ghmp kinase | DUE52_24225 | Not Available | Negative | 6034317 - 6035417 | 40116.4 |
| duf3472 domain-containing protein | DUE52_24230 | Not Available | Negative | 6035435 - 6036730 | 48383.8 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_24235 | Not Available | Negative | 6036741 - 6038192 | 53538.6 |
| susc/raga family tonb-linked outer membrane protein | DUE52_24240 | Not Available | Negative | 6038205 - 6041132 | 107065.0 |
| gfo/idh/moca family oxidoreductase | DUE52_24245 | Not Available | Negative | 6041296 - 6042666 | 50354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
