Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DUE52_02360 | Not Available | Negative | 585927 - 587843 | 72368.6 |
| t9ss c-terminal target domain-containing protein | DUE52_02365 | Not Available | Positive | 588033 - 588905 | 33173.7 |
| hypothetical protein | DUE52_02370 | Not Available | Negative | 588895 - 589215 | 12355.2 |
| hypothetical protein | DUE52_02375 | Not Available | Positive | 589229 - 589456 | 8389.5 |
| glycoside hydrolase | DUE52_02380 | Not Available | Positive | 589755 - 592835 | 114017.0 |
| t9ss c-terminal target domain-containing protein | DUE52_02385 | Not Available | Positive | 592908 - 597299 | 148092.0 |
| nucleoside deaminase | DUE52_02390 | Not Available | Positive | 597351 - 597788 | 16164.6 |
| superoxide dismutase | DUE52_02395 | Not Available | Positive | 597856 - 598464 | 22467.2 |
| Trna-his | Not Available | Not Available | Positive | 598577 - 598650 | Not Available |
| carotenoid biosynthesis protein | DUE52_02405 | Not Available | Positive | 598733 - 599380 | 24732.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
