Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_24100 | Not Available | Positive | 6008826 - 6009404 | 22746.7 |
| hypothetical protein | DUE52_24105 | Not Available | Positive | 6009442 - 6010434 | 36802.5 |
| cupin domain-containing protein | DUE52_24110 | Not Available | Negative | 6010428 - 6010934 | 18964.3 |
| peptidase m14 | DUE52_24115 | Not Available | Negative | 6010968 - 6012389 | 53333.6 |
| amino acid permease | DUE52_24120 | Not Available | Positive | 6012564 - 6013895 | 47806.0 |
| duf1572 domain-containing protein | DUE52_24125 | Not Available | Positive | 6014125 - 6014568 | 17376.9 |
| nadph-dependent oxidoreductase | DUE52_24130 | Not Available | Negative | 6014578 - 6015147 | 21387.6 |
| nucleoside deaminase | DUE52_24135 | Not Available | Negative | 6015207 - 6015644 | 16158.5 |
| ribonuclease r | DUE52_24140 | Not Available | Negative | 6015698 - 6018061 | 89864.9 |
| 3'-5' exonuclease | DUE52_24145 | Not Available | Negative | 6018200 - 6018931 | 28466.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
