Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase | DUE52_24050 | Not Available | Negative | 5998128 - 5998523 | 14827.5 |
| recq family atp-dependent dna helicase | DUE52_24055 | Not Available | Positive | 5998637 - 6000556 | 72972.9 |
| hypothetical protein | DUE52_24060 | Not Available | Positive | 6000561 - 6001964 | 51617.7 |
| triose-phosphate isomerase | DUE52_24065 | Not Available | Negative | 6002050 - 6002817 | 27732.1 |
| hypothetical protein | DUE52_24070 | Not Available | Positive | 6002941 - 6003006 | 2493.19 |
| signal protein pdz | DUE52_24075 | Not Available | Positive | 6003049 - 6004302 | 47209.4 |
| 50s ribosomal protein l28 | DUE52_24080 | Not Available | Negative | 6004455 - 6004694 | 8902.93 |
| ornithine--oxo-acid transaminase | DUE52_24085 | Not Available | Positive | 6005129 - 6006382 | 45910.4 |
| hypothetical protein | DUE52_24090 | Not Available | Positive | 6006445 - 6007962 | 52275.5 |
| rna polymerase sigma factor | DUE52_24095 | Not Available | Positive | 6008148 - 6008720 | 22184.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
