Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DUE52_23895 | Not Available | Negative | 5957658 - 5958947 | 47741.5 |
| hypothetical protein | DUE52_23900 | Not Available | Negative | 5959858 - 5960289 | 15737.9 |
| class i fructose-bisphosphate aldolase | DUE52_23905 | Not Available | Negative | 5960529 - 5961605 | 38828.2 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_23910 | Not Available | Negative | 5961671 - 5963494 | 66137.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_23915 | Not Available | Negative | 5963497 - 5964903 | 50915.8 |
| tolc family protein | DUE52_23920 | Not Available | Negative | 5964881 - 5966218 | 50969.0 |
| acrb/acrd/acrf family protein | DUE52_23925 | Not Available | Negative | 5966205 - 5968148 | 71091.0 |
| hypothetical protein | DUE52_23935 | Not Available | Negative | 5970109 - 5971185 | 40158.5 |
| exo-alpha-sialidase | DUE52_23940 | Not Available | Positive | 5971448 - 5972404 | 34392.3 |
| copper chaperone | DUE52_23945 | Not Available | Negative | 5972503 - 5972715 | 7514.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
