Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-helix bundle copper-binding protein | DUE52_23845 | Not Available | Positive | 5944703 - 5945044 | 12346.0 |
| cu(2+)-exporting atpase | DUE52_23850 | Not Available | Negative | 5946211 - 5948406 | 79477.7 |
| hypothetical protein | DUE52_23855 | Not Available | Negative | 5948733 - 5949125 | 14735.8 |
| arac family transcriptional regulator | DUE52_23860 | Not Available | Negative | 5949182 - 5949766 | 22137.7 |
| hypothetical protein | DUE52_23865 | Not Available | Negative | 5950040 - 5950231 | 7544.3 |
| heavy metal translocating p-type atpase | DUE52_23870 | Not Available | Positive | 5950583 - 5952637 | 73464.1 |
| hypothetical protein | DUE52_23875 | Not Available | Positive | 5953019 - 5953219 | 7388.88 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_23880 | Not Available | Negative | 5953213 - 5954388 | 43441.8 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_23885 | Not Available | Negative | 5954407 - 5955660 | 47541.8 |
| acrb/acrd/acrf family protein | DUE52_23890 | Not Available | Negative | 5955709 - 5957640 | 71708.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
