Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | DUE52_02310 | Not Available | Positive | 576246 - 577217 | 34753.4 |
| mota/tolq/exbb proton channel family protein | DUE52_02315 | Not Available | Positive | 577500 - 578201 | 25648.8 |
| biopolymer transporter exbd | DUE52_02320 | Not Available | Positive | 578293 - 578685 | 14506.1 |
| fad:protein fmn transferase | DUE52_02325 | Not Available | Negative | 578657 - 579634 | 35803.5 |
| chorismate synthase | DUE52_02330 | Not Available | Negative | 579703 - 580791 | 39368.4 |
| hypothetical protein | DUE52_02335 | Not Available | Negative | 580887 - 582296 | 52403.4 |
| hypothetical protein | DUE52_02340 | Not Available | Positive | 582436 - 582639 | 8122.23 |
| dihydroorotase | DUE52_02345 | Not Available | Negative | 582694 - 584028 | 49331.9 |
| porphobilinogen synthase | DUE52_02350 | Not Available | Negative | 584025 - 585011 | 36331.9 |
| dna-binding response regulator | DUE52_02355 | Not Available | Negative | 585140 - 585820 | 25980.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
