Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | DUE52_23490 | Not Available | Positive | 5883966 - 5885498 | 58392.6 |
| hypothetical protein | DUE52_23495 | Not Available | Positive | 5885664 - 5885915 | 9288.88 |
| duf1016 domain-containing protein | DUE52_23500 | Not Available | Negative | 5886806 - 5887792 | 38406.0 |
| recombinase family protein | DUE52_23505 | Not Available | Negative | 5887903 - 5888463 | 20762.2 |
| hypothetical protein | DUE52_23510 | Not Available | Negative | 5888468 - 5888815 | 12889.5 |
| hypothetical protein | DUE52_23515 | Not Available | Negative | 5888986 - 5889234 | 9306.33 |
| hypothetical protein | DUE52_23520 | Not Available | Negative | 5889218 - 5889715 | 19313.5 |
| hypothetical protein | DUE52_23525 | Not Available | Negative | 5889721 - 5890119 | 15424.3 |
| hypothetical protein | DUE52_23530 | Not Available | Negative | 5890116 - 5890409 | 11589.5 |
| nad(+) synthase | DUE52_23540 | Not Available | Negative | 5890970 - 5893039 | 76764.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
