Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_23340 | Not Available | Positive | 5851698 - 5852063 | 13437.1 |
| transporter | DUE52_23345 | Not Available | Positive | 5852060 - 5852827 | 26573.4 |
| stas/sec14 domain-containing protein | DUE52_23350 | Not Available | Positive | 5852856 - 5853221 | 14025.7 |
| duf1345 domain-containing protein | DUE52_23355 | Not Available | Positive | 5853289 - 5853945 | 24631.5 |
| pe-pgrs family protein | DUE52_23360 | Not Available | Positive | 5853965 - 5854861 | 32911.3 |
| hypothetical protein | DUE52_23365 | Not Available | Positive | 5854864 - 5855760 | 33698.5 |
| nickel transport complex, nikm subunit,transmembrane | DUE52_23370 | Not Available | Positive | 5856318 - 5856917 | 22595.0 |
| hypothetical protein | DUE52_23375 | Not Available | Negative | 5857033 - 5857254 | 8290.02 |
| hypothetical protein | DUE52_23380 | Not Available | Positive | 5857596 - 5857994 | 15269.1 |
| duf1232 domain-containing protein | DUE52_23385 | Not Available | Negative | 5858860 - 5859093 | 9029.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
