Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-alpha-sialidase | DUE52_23240 | Not Available | Negative | 5824615 - 5826000 | 51249.0 |
| histidine kinase | DUE52_23245 | Not Available | Positive | 5826244 - 5827293 | 39043.3 |
| ycei family protein | DUE52_23250 | Not Available | Positive | 5827345 - 5827998 | 24309.2 |
| hypothetical protein | DUE52_23255 | Not Available | Negative | 5828073 - 5829488 | 52075.1 |
| duf5117 domain-containing protein | DUE52_23260 | Not Available | Negative | 5829679 - 5832057 | 88468.0 |
| duf541 domain-containing protein | DUE52_23265 | Not Available | Negative | 5832274 - 5832990 | 26571.2 |
| hypothetical protein | DUE52_23270 | Not Available | Positive | 5833111 - 5833695 | 21850.7 |
| peptidase m23 | DUE52_23275 | Not Available | Negative | 5833836 - 5834492 | 24301.8 |
| mfs transporter | DUE52_23280 | Not Available | Positive | 5834631 - 5836121 | 53884.6 |
| translation initiation factor | DUE52_23285 | Not Available | Negative | 5836190 - 5836537 | 12376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
