Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DUE52_23190 | Not Available | Positive | 5810316 - 5810951 | 23431.5 |
| vcbs repeat-containing protein | DUE52_23195 | Not Available | Positive | 5811065 - 5812351 | 45951.4 |
| t9ss c-terminal target domain-containing protein | DUE52_23200 | Not Available | Positive | 5812396 - 5815080 | 96735.0 |
| hypothetical protein | DUE52_23205 | Not Available | Positive | 5815093 - 5815551 | 16948.2 |
| hypothetical protein | DUE52_23210 | Not Available | Positive | 5815651 - 5816586 | 35411.3 |
| dehydrogenase | DUE52_23215 | Not Available | Positive | 5816870 - 5820706 | 142897.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | DUE52_23220 | Not Available | Negative | 5820947 - 5822389 | 52262.8 |
| twin-arginine translocase tata/tate family subunit | DUE52_23225 | Not Available | Negative | 5822593 - 5822802 | 7566.52 |
| duf1232 domain-containing protein | DUE52_23230 | Not Available | Negative | 5822887 - 5823321 | 16147.8 |
| malate dehydrogenase | DUE52_23235 | Not Available | Positive | 5823492 - 5824427 | 32844.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
