Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_23140 | Not Available | Negative | 5795346 - 5796017 | 24957.1 |
| rna polymerase sigma-70 factor | DUE52_23145 | Not Available | Negative | 5796094 - 5796633 | 20962.0 |
| acetylxylan esterase | DUE52_23150 | Not Available | Negative | 5796743 - 5798035 | 47552.4 |
| glycoside hydrolase | DUE52_23155 | Not Available | Negative | 5798115 - 5801450 | 121406.0 |
| pkd domain-containing protein | DUE52_23160 | Not Available | Negative | 5801528 - 5805301 | 137321.0 |
| nudix hydrolase | DUE52_23165 | Not Available | Positive | 5805431 - 5806207 | 30167.0 |
| hypothetical protein | DUE52_23170 | Not Available | Negative | 5806258 - 5806953 | 24275.9 |
| hypothetical protein | DUE52_23175 | Not Available | Positive | 5807593 - 5808483 | 33621.7 |
| hypothetical protein | DUE52_23180 | Not Available | Positive | 5808480 - 5809142 | 25361.3 |
| sensor histidine kinase | DUE52_23185 | Not Available | Positive | 5809144 - 5810238 | 41755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
