Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucuronidase | DUE52_02260 | Not Available | Positive | 565015 - 567108 | 78700.5 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_02265 | Not Available | Positive | 567133 - 567915 | 27992.7 |
| sugar phosphate isomerase/epimerase | DUE52_02270 | Not Available | Positive | 568001 - 568876 | 32875.4 |
| l-alanine-dl-glutamate epimerase | DUE52_02275 | Not Available | Positive | 568986 - 570374 | 51181.1 |
| dna-binding response regulator | DUE52_02280 | Not Available | Positive | 570417 - 570884 | 17680.1 |
| duf4199 domain-containing protein | DUE52_02285 | Not Available | Positive | 571001 - 571537 | 20100.1 |
| phosphoesterase | DUE52_02290 | Not Available | Positive | 571701 - 572615 | 34763.3 |
| Trna-pro | Not Available | Not Available | Positive | 572695 - 572768 | Not Available |
| m1 family peptidase | DUE52_02300 | Not Available | Negative | 572880 - 575249 | 89294.9 |
| hupe/urej family protein | DUE52_02305 | Not Available | Negative | 575481 - 576080 | 22252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
