Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_23040 | Not Available | Positive | 5765060 - 5765410 | 13216.1 |
| hypothetical protein | DUE52_23045 | Not Available | Negative | 5765472 - 5765666 | 7214.58 |
| duf202 domain-containing protein | DUE52_23050 | Not Available | Positive | 5765785 - 5766177 | 14228.0 |
| tetr/acrr family transcriptional regulator | DUE52_23055 | Not Available | Negative | 5766191 - 5766901 | 27753.5 |
| abc transporter atp-binding protein | DUE52_23060 | Not Available | Positive | 5767018 - 5768022 | 37048.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_23065 | Not Available | Positive | 5768015 - 5769367 | 50851.2 |
| tolc family protein | DUE52_23070 | Not Available | Positive | 5769364 - 5770824 | 54850.7 |
| rna-binding protein | DUE52_23075 | Not Available | Negative | 5771130 - 5774552 | 125617.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_23080 | Not Available | Negative | 5774664 - 5776184 | 56534.9 |
| susc/raga family tonb-linked outer membrane protein | DUE52_23085 | Not Available | Negative | 5776231 - 5779755 | 128226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
