Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | DUE52_22985 | Not Available | Positive | 5746177 - 5748516 | 89657.4 |
| tonb-dependent receptor | DUE52_22995 | Not Available | Positive | 5749281 - 5751539 | 84731.8 |
| hypothetical protein | DUE52_23000 | Not Available | Positive | 5751752 - 5751997 | 9237.1 |
| class a beta-lactamase-related serine hydrolase | DUE52_23005 | Not Available | Positive | 5752169 - 5753224 | 38420.1 |
| t9ss c-terminal target domain-containing protein | DUE52_23010 | Not Available | Positive | 5753425 - 5756946 | 130702.0 |
| sensor histidine kinase | DUE52_23015 | Not Available | Negative | 5757131 - 5758498 | 50937.1 |
| dna-binding response regulator | DUE52_23020 | Not Available | Negative | 5758495 - 5759172 | 25497.8 |
| tolc family protein | DUE52_23025 | Not Available | Positive | 5759279 - 5760721 | 53526.4 |
| acrb/acrd/acrf family protein | DUE52_23030 | Not Available | Positive | 5760743 - 5763943 | 115272.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_23035 | Not Available | Positive | 5763852 - 5765054 | 43944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
