Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DUE52_22935 | Not Available | Positive | 5734151 - 5734774 | 23841.3 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | DUE52_22940 | Not Available | Positive | 5734867 - 5735637 | 29458.3 |
| isoprenylcysteine carboxylmethyltransferase family protein | DUE52_22945 | Not Available | Positive | 5735634 - 5736350 | 27432.2 |
| tetr/acrr family transcriptional regulator | DUE52_22950 | Not Available | Positive | 5736507 - 5737130 | 23690.0 |
| tolc family protein | DUE52_22955 | Not Available | Positive | 5737232 - 5738551 | 48692.1 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_22960 | Not Available | Positive | 5738573 - 5739622 | 37849.8 |
| acrb/acrd/acrf family protein | DUE52_22965 | Not Available | Positive | 5739749 - 5742895 | 114483.0 |
| phosphopantetheine-binding protein | DUE52_22970 | Not Available | Positive | 5743186 - 5743431 | 9378.1 |
| nad-dependent epimerase/dehydratase family protein | DUE52_22975 | Not Available | Positive | 5743503 - 5744471 | 36250.4 |
| phospholipid carrier-dependent glycosyltransferase | DUE52_22980 | Not Available | Positive | 5744498 - 5746039 | 57643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
