Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | DUE52_22885 | Not Available | Negative | 5723950 - 5725110 | 43507.7 |
| k(+)-transporting atpase subunit c | DUE52_22890 | Not Available | Negative | 5725274 - 5725837 | 19735.9 |
| k(+)-transporting atpase subunit b | DUE52_22895 | Not Available | Negative | 5725850 - 5727913 | 72850.1 |
| hypothetical protein | DUE52_22900 | Not Available | Positive | 5727945 - 5728241 | 11723.9 |
| potassium-transporting atpase subunit kdpa | DUE52_22905 | Not Available | Negative | 5728432 - 5730147 | 61329.8 |
| potassium-transporting atpase subunit f | DUE52_22910 | Not Available | Negative | 5730159 - 5730239 | 3048.06 |
| l-rhamnose mutarotase | DUE52_22915 | Not Available | Negative | 5730678 - 5731019 | 13419.0 |
| sugar phosphate isomerase/epimerase | DUE52_22920 | Not Available | Negative | 5731106 - 5731918 | 29208.9 |
| sorbitol dehydrogenase | DUE52_22925 | Not Available | Negative | 5731918 - 5732955 | 36884.4 |
| aldo/keto reductase | DUE52_22930 | Not Available | Negative | 5732948 - 5733904 | 35547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
