Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_22835 | Not Available | Positive | 5711388 - 5713442 | 79316.3 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_22840 | Not Available | Negative | 5713559 - 5714449 | 32773.4 |
| hypothetical protein | DUE52_22845 | Not Available | Negative | 5714596 - 5715168 | 20685.9 |
| serine hydrolase | DUE52_22850 | Not Available | Negative | 5715395 - 5716831 | 53681.8 |
| class a beta-lactamase-related serine hydrolase | DUE52_22855 | Not Available | Positive | 5717067 - 5718527 | 54401.6 |
| ring-cleaving dioxygenase | DUE52_22860 | Not Available | Positive | 5718602 - 5719537 | 34904.2 |
| esterase | DUE52_22865 | Not Available | Negative | 5719532 - 5720260 | 28431.0 |
| gdsl family lipase | DUE52_22870 | Not Available | Negative | 5720333 - 5720926 | 22963.3 |
| hamp domain-containing protein | DUE52_22875 | Not Available | Negative | 5720986 - 5722725 | 64557.5 |
| sensor protein kdpd | DUE52_22880 | Not Available | Negative | 5722722 - 5723849 | 42722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
