Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DUE52_22785 | Not Available | Positive | 5696380 - 5698557 | 79193.8 |
| heparinase | DUE52_22790 | Not Available | Positive | 5698554 - 5700113 | 59858.8 |
| glycosyltransferase wbub | DUE52_22795 | Not Available | Positive | 5700110 - 5701357 | 46348.1 |
| nad-dependent epimerase/dehydratase family protein | DUE52_22800 | Not Available | Positive | 5701290 - 5702285 | 36067.6 |
| glycosyltransferase | DUE52_22805 | Not Available | Positive | 5702295 - 5703431 | 43911.5 |
| udp-glcnac--udp-phosphate glcnac-1-phosphate transferase | DUE52_22810 | Not Available | Positive | 5703428 - 5704450 | 38216.6 |
| hypothetical protein | DUE52_22815 | Not Available | Negative | 5704408 - 5706000 | 59147.7 |
| hypothetical protein | DUE52_22820 | Not Available | Negative | 5706019 - 5709378 | 124234.0 |
| hypothetical protein | DUE52_22825 | Not Available | Negative | 5709435 - 5709830 | 15164.2 |
| sensor histidine kinase | DUE52_22830 | Not Available | Positive | 5710115 - 5711161 | 40859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
