Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DUE52_22735 | Not Available | Negative | 5682132 - 5682433 | 11652.8 |
| sugar transporter | DUE52_22740 | Not Available | Positive | 5683032 - 5685338 | 85108.0 |
| lipopolysaccharide biosynthesis protein | DUE52_22745 | Not Available | Positive | 5685405 - 5686430 | 38082.2 |
| lipopolysaccharide biosynthesis protein | DUE52_22750 | Not Available | Positive | 5686491 - 5687840 | 49258.1 |
| glycosyltransferase | DUE52_22755 | Not Available | Positive | 5687837 - 5689048 | 45008.4 |
| glycosyltransferase | DUE52_22760 | Not Available | Positive | 5689057 - 5690193 | 43421.1 |
| glycosyltransferase | DUE52_22765 | Not Available | Positive | 5691218 - 5692666 | 54913.0 |
| hypothetical protein | DUE52_22770 | Not Available | Positive | 5692690 - 5693433 | 28232.6 |
| class i sam-dependent methyltransferase | DUE52_22775 | Not Available | Positive | 5693546 - 5694352 | 30844.9 |
| asparagine synthase (glutamine-hydrolyzing) | DUE52_22780 | Not Available | Positive | 5694469 - 5696376 | 72057.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
