Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DUE52_22635 | Not Available | Negative | 5652093 - 5654330 | 81876.4 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_22640 | Not Available | Negative | 5654350 - 5655792 | 53702.6 |
| susc/raga family tonb-linked outer membrane protein | DUE52_22645 | Not Available | Negative | 5655817 - 5659269 | 125864.0 |
| duf4974 domain-containing protein | DUE52_22650 | Not Available | Negative | 5659514 - 5660656 | 42609.8 |
| rna polymerase sigma factor | DUE52_22655 | Not Available | Negative | 5660982 - 5661596 | 23993.9 |
| hypothetical protein | DUE52_22660 | Not Available | Negative | 5661737 - 5662378 | 23716.3 |
| mgtc/sapb family protein | DUE52_22665 | Not Available | Negative | 5662457 - 5663086 | 22732.9 |
| excinuclease abc subunit a | DUE52_22670 | Not Available | Positive | 5663248 - 5666232 | 110352.0 |
| nuclear transport factor 2 family protein | DUE52_22675 | Not Available | Positive | 5666442 - 5666792 | 13548.0 |
| grpb family protein | DUE52_22680 | Not Available | Positive | 5666958 - 5667491 | 20903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
