Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_02205 | Not Available | Negative | 554117 - 554323 | 7544.56 |
| energy transducer tonb | DUE52_02210 | Not Available | Negative | 554332 - 555159 | 29904.8 |
| biopolymer transporter exbd | DUE52_02215 | Not Available | Negative | 555200 - 555730 | 19406.7 |
| biopolymer transporter exbd | DUE52_02220 | Not Available | Negative | 555779 - 556405 | 23013.8 |
| mota/tolq/exbb proton channel family protein | DUE52_02225 | Not Available | Negative | 556449 - 557282 | 29762.1 |
| mfs transporter | DUE52_02230 | Not Available | Negative | 557830 - 559005 | 42257.3 |
| hypothetical protein | DUE52_02235 | Not Available | Negative | 559116 - 559493 | 13651.5 |
| rraa family protein | DUE52_02240 | Not Available | Positive | 559800 - 560750 | 35722.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | DUE52_02245 | Not Available | Positive | 560878 - 562146 | 46544.2 |
| mannonate dehydratase | DUE52_02255 | Not Available | Positive | 563698 - 564915 | 45293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
