Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_22585 | Not Available | Negative | 5642062 - 5642835 | 29518.9 |
| hypothetical protein | DUE52_22590 | Not Available | Negative | 5642934 - 5643494 | 21003.1 |
| hypothetical protein | DUE52_22595 | Not Available | Negative | 5643562 - 5644314 | 29167.8 |
| hypothetical protein | DUE52_22600 | Not Available | Negative | 5644351 - 5645247 | 32826.5 |
| hypothetical protein | DUE52_22605 | Not Available | Negative | 5645244 - 5645843 | 22601.0 |
| rna polymerase sigma factor | DUE52_22610 | Not Available | Negative | 5645846 - 5646313 | 17834.4 |
| smp-30/gluconolactonase/lre family protein | DUE52_22615 | Not Available | Negative | 5646500 - 5647300 | 29072.4 |
| hypothetical protein | DUE52_22620 | Not Available | Positive | 5648583 - 5648999 | 16268.7 |
| exo-alpha-sialidase | DUE52_22625 | Not Available | Negative | 5649053 - 5650222 | 43355.3 |
| fad-dependent oxidoreductase | DUE52_22630 | Not Available | Negative | 5650286 - 5651956 | 62735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
