Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5009 domain-containing protein | DUE52_22535 | Not Available | Positive | 5628826 - 5629980 | 42688.9 |
| alpha/beta hydrolase | DUE52_22540 | Not Available | Negative | 5630018 - 5630947 | 33594.4 |
| uridine kinase | DUE52_22545 | Not Available | Negative | 5630994 - 5631629 | 24384.5 |
| transcriptional regulator | DUE52_22550 | Not Available | Negative | 5631659 - 5633908 | 80951.7 |
| thymidine kinase | DUE52_22555 | Not Available | Negative | 5633943 - 5634569 | 23672.4 |
| hypothetical protein | DUE52_22560 | Not Available | Positive | 5634709 - 5635914 | 45265.4 |
| trab/gumn family protein | DUE52_22565 | Not Available | Negative | 5635915 - 5636769 | 32086.9 |
| duf4281 domain-containing protein | DUE52_22570 | Not Available | Negative | 5636936 - 5637361 | 16190.4 |
| susc/raga family tonb-linked outer membrane protein | DUE52_22575 | Not Available | Positive | 5637583 - 5640630 | 110061.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_22580 | Not Available | Positive | 5640694 - 5641995 | 46618.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
