Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DUE52_22485 | Not Available | Negative | 5616135 - 5616473 | 12498.2 |
| hypothetical protein | DUE52_22490 | Not Available | Positive | 5616539 - 5616775 | 9156.95 |
| t9ss c-terminal target domain-containing protein | DUE52_22495 | Not Available | Negative | 5616776 - 5617786 | 36294.7 |
| gfo/idh/moca family oxidoreductase | DUE52_22500 | Not Available | Negative | 5617898 - 5619220 | 48809.3 |
| helix-turn-helix domain-containing protein | DUE52_22505 | Not Available | Positive | 5619412 - 5620227 | 31654.3 |
| tonb-dependent receptor | DUE52_22510 | Not Available | Positive | 5620323 - 5622773 | 90431.4 |
| phytanoyl-coa dioxygenase | DUE52_22515 | Not Available | Negative | 5622836 - 5623819 | 37504.0 |
| nadh-quinone oxidoreductase subunit l | DUE52_22520 | Not Available | Positive | 5623968 - 5625872 | 68811.6 |
| nadh-quinone oxidoreductase subunit m | DUE52_22525 | Not Available | Positive | 5625905 - 5627569 | 60888.9 |
| prohibitin family protein | DUE52_22530 | Not Available | Positive | 5627776 - 5628681 | 33590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
