Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_22385 | Not Available | Negative | 5587125 - 5587556 | 15393.1 |
| hypothetical protein | DUE52_22390 | Not Available | Negative | 5587768 - 5591604 | 140966.0 |
| mbl fold metallo-hydrolase | DUE52_22395 | Not Available | Negative | 5591912 - 5593285 | 49969.0 |
| amino acid permease | DUE52_22400 | Not Available | Negative | 5593412 - 5594983 | 56980.4 |
| protein translocase subunit secdf | DUE52_22405 | Not Available | Negative | 5595121 - 5598120 | 107326.0 |
| hypothetical protein | DUE52_22410 | Not Available | Negative | 5598255 - 5598629 | 13955.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | DUE52_22415 | Not Available | Positive | 5598755 - 5599588 | 30547.0 |
| nucleotidyltransferase domain-containing protein | DUE52_22420 | Not Available | Positive | 5599592 - 5599927 | 12897.3 |
| hypothetical protein | DUE52_22425 | Not Available | Positive | 5599873 - 5600298 | 16377.4 |
| quinolinate synthase nada | DUE52_22430 | Not Available | Positive | 5600325 - 5601335 | 37301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
