Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | DUE52_22335 | Not Available | Negative | 5573687 - 5575312 | 58332.2 |
| mce family protein | DUE52_22340 | Not Available | Negative | 5575463 - 5576449 | 35218.9 |
| n-acetylmuramoyl-l-alanine amidase | DUE52_22345 | Not Available | Negative | 5576602 - 5577366 | 28629.0 |
| lps-assembly protein lptd | DUE52_22350 | Not Available | Positive | 5577690 - 5580524 | 104843.0 |
| duf1573 domain-containing protein | DUE52_22355 | Not Available | Negative | 5580610 - 5581068 | 15900.9 |
| transketolase | DUE52_22360 | Not Available | Positive | 5581443 - 5583797 | 88129.2 |
| 4fe-4s dicluster domain-containing protein | DUE52_22365 | Not Available | Positive | 5583867 - 5585285 | 51744.7 |
| nadh-quinone oxidoreductase subunit j | DUE52_22370 | Not Available | Positive | 5585310 - 5585834 | 19010.9 |
| nadh-quinone oxidoreductase subunit nuok | DUE52_22375 | Not Available | Positive | 5585842 - 5586150 | 11247.3 |
| hypothetical protein | DUE52_22380 | Not Available | Negative | 5586282 - 5586941 | 24032.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
