Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_22235 | Not Available | Positive | 5548519 - 5548713 | 7875.12 |
| putative toxin-antitoxin system toxin component, pin family | DUE52_22240 | Not Available | Positive | 5548710 - 5549150 | 16883.0 |
| beta-n-acetylhexosaminidase | DUE52_22245 | Not Available | Negative | 5549122 - 5551428 | 85631.7 |
| hypothetical protein | DUE52_22250 | Not Available | Negative | 5551506 - 5554667 | 119165.0 |
| (2fe-2s)-binding protein | DUE52_22255 | Not Available | Negative | 5554780 - 5555094 | 11086.2 |
| nad(p)/fad-dependent oxidoreductase | DUE52_22260 | Not Available | Negative | 5555203 - 5556207 | 36656.3 |
| right-handed parallel beta-helix repeat-containing protein | DUE52_22265 | Not Available | Positive | 5556563 - 5558080 | 53262.2 |
| is5 family transposase | DUE52_22270 | Not Available | Negative | 5558187 - 5558948 | 29519.5 |
| dna-binding response regulator | DUE52_22275 | Not Available | Negative | 5559171 - 5559887 | 27512.6 |
| hypothetical protein | DUE52_22280 | Not Available | Negative | 5559884 - 5561383 | 57349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
