Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit d | DUE52_02155 | Not Available | Negative | 541329 - 542576 | 47193.6 |
| nadh-quinone oxidoreductase subunit c | DUE52_02160 | Not Available | Negative | 542687 - 543190 | 19725.5 |
| nadh-quinone oxidoreductase subunit b | DUE52_02165 | Not Available | Negative | 543310 - 543855 | 19888.1 |
| nadh-quinone oxidoreductase subunit a | DUE52_02170 | Not Available | Negative | 543912 - 544283 | 13963.5 |
| t9ss c-terminal target domain-containing protein | DUE52_02175 | Not Available | Negative | 544426 - 546564 | 77399.2 |
| t9ss c-terminal target domain-containing protein | DUE52_02180 | Not Available | Negative | 546760 - 549486 | 97646.1 |
| gtpase obge | DUE52_02185 | Not Available | Negative | 549541 - 550542 | 36000.2 |
| adenylate kinase | DUE52_02190 | Not Available | Negative | 550572 - 551162 | 21548.0 |
| tetratricopeptide repeat protein | DUE52_02195 | Not Available | Negative | 551323 - 553086 | 64201.6 |
| phosphate abc transporter substrate-binding protein | DUE52_02200 | Not Available | Negative | 553182 - 554114 | 34580.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
