Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DUE52_22085 | Not Available | Negative | 5499412 - 5500083 | 26406.4 |
| duf4976 domain-containing protein | DUE52_22090 | Not Available | Negative | 5500331 - 5501755 | 53365.9 |
| pyrroloquinoline quinone-dependent dehydrogenase | DUE52_22095 | Not Available | Negative | 5501811 - 5503931 | 77405.2 |
| pyrroloquinoline quinone-dependent dehydrogenase | DUE52_22100 | Not Available | Negative | 5503974 - 5506097 | 77223.5 |
| alpha/beta hydrolase | DUE52_22105 | Not Available | Negative | 5506119 - 5507042 | 33858.3 |
| sugar phosphate isomerase/epimerase | DUE52_22110 | Not Available | Negative | 5507045 - 5507941 | 33738.8 |
| arylsulfatase | DUE52_22115 | Not Available | Negative | 5507985 - 5509550 | 58592.0 |
| duf4976 domain-containing protein | DUE52_22120 | Not Available | Negative | 5509766 - 5511295 | 58488.8 |
| agarase | DUE52_22125 | Not Available | Negative | 5511392 - 5512501 | 43427.4 |
| heparinase | DUE52_22130 | Not Available | Negative | 5512589 - 5514565 | 75339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
