Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4976 domain-containing protein | DUE52_22035 | Not Available | Negative | 5476785 - 5478230 | 54054.9 |
| xylan esterase | DUE52_22040 | Not Available | Negative | 5478294 - 5480426 | 77397.2 |
| sialate o-acetylesterase | DUE52_22045 | Not Available | Negative | 5480427 - 5481857 | 52405.8 |
| heparinase | DUE52_22050 | Not Available | Negative | 5481936 - 5483900 | 74207.0 |
| t9ss c-terminal target domain-containing protein | DUE52_22055 | Not Available | Negative | 5483982 - 5487983 | 146927.0 |
| t9ss c-terminal target domain-containing protein | DUE52_22060 | Not Available | Negative | 5488020 - 5490491 | 91056.2 |
| xylan esterase | DUE52_22065 | Not Available | Negative | 5490647 - 5492878 | 82440.8 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_22070 | Not Available | Negative | 5493083 - 5494786 | 64095.3 |
| tonb-dependent receptor | DUE52_22075 | Not Available | Negative | 5494800 - 5498312 | 128533.0 |
| duf4974 domain-containing protein | DUE52_22080 | Not Available | Negative | 5498348 - 5499364 | 38244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
