Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_21985 | Not Available | Positive | 5465793 - 5466248 | 16248.0 |
| hydrolase | DUE52_21990 | Not Available | Positive | 5466593 - 5468881 | 87489.9 |
| chromate transporter | DUE52_21995 | Not Available | Positive | 5468901 - 5470073 | 41793.3 |
| duf2490 domain-containing protein | DUE52_22000 | Not Available | Positive | 5470213 - 5470761 | 21081.2 |
| duf1810 domain-containing protein | DUE52_22005 | Not Available | Negative | 5471252 - 5471686 | 16361.8 |
| hypothetical protein | DUE52_22010 | Not Available | Negative | 5471904 - 5472419 | 19037.6 |
| hypothetical protein | DUE52_22015 | Not Available | Positive | 5472885 - 5473085 | 7316.77 |
| hypothetical protein | DUE52_22020 | Not Available | Negative | 5473270 - 5473662 | 15489.2 |
| fad-dependent oxidoreductase | DUE52_22025 | Not Available | Negative | 5474047 - 5475426 | 49692.5 |
| glycoside hydrolase family 28 protein | DUE52_22030 | Not Available | Negative | 5475438 - 5476757 | 49006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
