Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_21835 | Not Available | Negative | 5428978 - 5429370 | 15200.0 |
| hypothetical protein | DUE52_21840 | Not Available | Negative | 5429375 - 5430733 | 52760.3 |
| mobilization protein | DUE52_21845 | Not Available | Negative | 5431191 - 5432078 | 33466.1 |
| hypothetical protein | DUE52_21850 | Not Available | Negative | 5432339 - 5433556 | 46886.6 |
| hypothetical protein | DUE52_21855 | Not Available | Negative | 5433652 - 5434899 | 47633.1 |
| xre family transcriptional regulator | DUE52_21860 | Not Available | Positive | 5435306 - 5435740 | 16718.4 |
| hypothetical protein | DUE52_21865 | Not Available | Negative | 5435807 - 5438293 | 97358.2 |
| xre family transcriptional regulator | DUE52_21870 | Not Available | Negative | 5439039 - 5439335 | 11467.2 |
| hypothetical protein | DUE52_21875 | Not Available | Positive | 5439403 - 5440449 | 39363.4 |
| duf4339 domain-containing protein | DUE52_21880 | Not Available | Positive | 5440516 - 5441424 | 34057.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
