Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prsw family intramembrane metalloprotease | DUE52_21785 | Not Available | Positive | 5419306 - 5420646 | 49599.0 |
| m20/m25/m40 family metallo-hydrolase | DUE52_21790 | Not Available | Positive | 5420930 - 5422486 | 57095.1 |
| hypothetical protein | DUE52_21795 | Not Available | Negative | 5422566 - 5422892 | 12446.5 |
| nucleoside hydrolase | DUE52_21800 | Not Available | Negative | 5423056 - 5424039 | 35864.3 |
| hypothetical protein | DUE52_21805 | Not Available | Negative | 5424071 - 5425174 | 41519.7 |
| gfo/idh/moca family oxidoreductase | DUE52_21810 | Not Available | Negative | 5425240 - 5426538 | 48915.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DUE52_21815 | Not Available | Positive | 5426857 - 5427582 | 27380.3 |
| port family protein | DUE52_21820 | Not Available | Positive | 5427528 - 5428268 | 28375.3 |
| Trna-val | Not Available | Not Available | Positive | 5428443 - 5428520 | Not Available |
| hypothetical protein | DUE52_21830 | Not Available | Negative | 5428630 - 5428974 | 13113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
