Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent metal cation transporter | DUE52_21735 | Not Available | Positive | 5407749 - 5409089 | 48083.8 |
| potassium transporter kup | DUE52_21740 | Not Available | Positive | 5409167 - 5411110 | 73218.2 |
| nad-dependent epimerase/dehydratase family protein | DUE52_21745 | Not Available | Positive | 5411123 - 5412184 | 39043.9 |
| tvp38/tmem64 family protein | DUE52_21750 | Not Available | Negative | 5412208 - 5412939 | 26451.9 |
| ribonuclease e/g | DUE52_21755 | Not Available | Negative | 5413038 - 5414600 | 59234.9 |
| hypothetical protein | DUE52_21760 | Not Available | Negative | 5414861 - 5415703 | 31588.0 |
| integration host factor subunit beta | DUE52_21765 | Not Available | Negative | 5415784 - 5416089 | 11466.9 |
| a/g-specific adenine glycosylase | DUE52_21770 | Not Available | Positive | 5416232 - 5417320 | 41954.3 |
| single-stranded dna-binding protein | DUE52_21775 | Not Available | Positive | 5417372 - 5417917 | 19824.9 |
| gliding motility-associated protein glde | DUE52_21780 | Not Available | Positive | 5417950 - 5419278 | 49916.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
